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Commit 5379b488 authored by abuddenberg's avatar abuddenberg
Browse files

snapshot Thu Apr 9 16:35:15 EDT 2015

parent f4c738dd
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Inline Side-by-side
gcis_clients/domain.py
View file @ 5379b488
......@@ -50,7 +50,7 @@ class Gcisbase(object):
return self
def as_json(self, indent=0, omit_fields=[]):
def as_json(self, indent=0, omit_fields=()):
out_fields = set(self.gcis_fields) - (set(['uri', 'href']) | set(omit_fields))
return json.dumps({f: getattr(self, f) for f in out_fields}, indent=indent)
......@@ -80,7 +80,7 @@ class GcisObject(Gcisbase):
class Figure(GcisObject):
def __init__(self, data, trans=()):
def __init__(self, data, local_path=None, remote_path=None, trans=()):
self.gcis_fields = [
'usage_limits', 'kindred_figures', 'time_start', 'time_end', 'keywords', 'lat_min', 'create_dt', 'lat_max',
'title', 'ordinal', 'lon_min', 'report_identifier', 'chapter', 'submission_dt', 'uri', 'lon_max',
......@@ -89,6 +89,9 @@ class Figure(GcisObject):
super(Figure, self).__init__(data, fields=self.gcis_fields, trans=trans)
self.local_path = local_path
self.remote_path = remote_path
#Special case for chapter
chap_tree = data.pop('chapter', None)
self.chapter = Chapter(chap_tree) if chap_tree else self.chapter
......@@ -126,8 +129,8 @@ class Figure(GcisObject):
else:
self.chapter = chp
def as_json(self, indent=0):
return super(Figure, self).as_json(omit_fields=['images', 'chapter', 'kindred_figures', 'keywords'])
def as_json(self, indent=0, omit_fields=('images', 'chapter', 'kindred_figures', 'keywords')):
return super(Figure, self).as_json(omit_fields=omit_fields)
def __str__(self):
string = '{f_id}: Figure {f_num}: {f_name}\n\tImages: {imgs}'.format(
......@@ -153,12 +156,40 @@ class Figure(GcisObject):
return super(Figure, self).merge(other)
class Report(GcisObject):
def __init__(self, data, trans=()):
self.gcis_fields = ['doi', 'contact_note', 'title', 'publication_year', 'summary', 'url', 'contact_email', 'identifier', 'report_type_identifier']
super(Report, self).__init__(data, fields=self.gcis_fields, trans=trans)
# if self.report_type_identifier not in ['report', 'assessment', 'technical_input', 'indicator']:
# raise ValueError("report_type_identifier must be one of 'report', 'assessment', 'technical_input', 'indicator'")
def as_json(self, indent=0, omit_fields=()):
return super(Report, self).as_json(omit_fields=omit_fields)
def __repr__(self):
return 'Report: {id}'.format(id=self.identifier)
def __str__(self):
return self.__repr__()
class Chapter(GcisObject):
def __init__(self, data):
self.gcis_fields = ['report_identifier', 'identifier', 'number', 'url', 'title']
super(Chapter, self).__init__(data, fields=self.gcis_fields)
def as_json(self, indent=0, omit_fields=()):
return super(Chapter, self).as_json(omit_fields=omit_fields)
def __repr__(self):
return 'Chapter: {id}'.format(id=self.identifier)
def __str__(self):
return self.__repr__()
class Image(GcisObject):
def __init__(self, data, local_path=None, remote_path=None, trans=()):
......@@ -271,8 +302,8 @@ class Dataset(GcisObject):
def __str__(self):
return self.__repr__()
def as_json(self, indent=0):
return super(Dataset, self).as_json(omit_fields=['files', 'parents', 'contributors', 'references'])
def as_json(self, indent=0, omit_fields=('files', 'parents', 'contributors', 'references')):
return super(Dataset, self).as_json(omit_fields=omit_fields)
def merge(self, other):
for k in self.__dict__:
......@@ -326,8 +357,8 @@ class Activity(GcisObject):
super(Activity, self).__init__(data, fields=self.gcis_fields, trans=trans)
def as_json(self, indent=0):
return super(Activity, self).as_json(omit_fields=['metholodogies', 'publication_maps'])
def as_json(self, indent=0, omit_fields=('metholodogies', 'publication_maps')):
return super(Activity, self).as_json(omit_fields=omit_fields)
def __repr__(self):
return 'Activity: {id}'.format(id=self.identifier)
......@@ -343,8 +374,8 @@ class Person(Gcisbase):
super(Person, self).__init__(data, fields=self.gcis_fields, trans=trans)
def as_json(self, indent=0):
return super(Person, self).as_json(omit_fields=['contributors'])
def as_json(self, indent=0, omit_fields=('contributors',)):
return super(Person, self).as_json(omit_fields=omit_fields)
def __repr__(self):
return 'Person: {id}: {fn} {ln}'.format(id=self.id, fn=self.first_name, ln=self.last_name)
......@@ -613,4 +644,4 @@ class Parent(Gcisbase):
)
def __str__(self):
return self.__repr__()
\ No newline at end of file
return self.__repr__()
gcis_clients/gcis_client.py
View file @ 5379b488
......@@ -38,7 +38,7 @@ def http_resp(fn):
if resp.status_code == 200:
return resp
else:
raise Exception(resp.text)
raise Exception('{url}\n{stat} {txt}'.format(url=resp.url, stat=resp.status_code, txt=resp.text))
return wrapped
......@@ -283,6 +283,60 @@ class GcisClient(object):
resp = self.s.get(url, verify=False)
return resp.status_code, resp.text
@http_resp
def get_report(self, report_id):
url = '{b}/report/{id}'.format(b=self.base_url, id=report_id)
resp = self.s.get(url, verify=False)
return resp.json()
@exists
def report_exists(self, report_id):
url = '{b}/report/{id}'.format(b=self.base_url, id=report_id)
return self.s.head(url, verify=False)
@http_resp
def create_report(self, report):
url = '{b}/report/'.format(b=self.base_url)
return self.s.post(url, data=report.as_json(), verify=False)
@http_resp
def update_report(self, report, old_id=None):
url = '{b}/report/{id}'.format(b=self.base_url, id=old_id or report.identifier)
return self.s.post(url, data=report.as_json(), verify=False)
@http_resp
def delete_report(self, report):
url = '{b}/report/{ds}'.format(b=self.base_url, ds=report.identifier)
return self.s.delete(url, verify=False)
@http_resp
def get_chapter(self, chapter_id):
url = '{b}/chapter/{id}'.format(b=self.base_url, id=chapter_id)
resp = self.s.get(url, verify=False)
return resp.json()
@exists
def chapter_exists(self, report_id, chapter_id):
url = '{b}/report/{rpt}/chapter/{id}'.format(b=self.base_url, rpt=report_id, id=chapter_id)
return self.s.head(url, verify=False)
@http_resp
def create_chapter(self, report_id, chapter):
url = '{b}/report/{rpt}/chapter/'.format(b=self.base_url, rpt=report_id)
return self.s.post(url, data=chapter.as_json(), verify=False)
@http_resp
def update_chapter(self, chapter, old_id=None):
url = '{b}/chapter/{id}'.format(b=self.base_url, id=old_id or chapter.identifier)
return self.s.post(url, data=chapter.as_json(), verify=False)
@http_resp
def delete_chapter(self, chapter):
url = '{b}/chapter/{ds}'.format(b=self.base_url, ds=chapter.identifier)
return self.s.delete(url, verify=False)
def get_keyword_listing(self):
url = '{b}/gcmd_keyword'.format(b=self.base_url)
resp = self.s.get(url, params={'all': '1'}, verify=False)
......
gcis_clients/survey_client.py
View file @ 5379b488
......@@ -3,6 +3,7 @@ __author__ = 'abuddenberg'
import getpass
import requests
import re
from os.path import join, basename
from gcis_clients.domain import Figure, Image, Dataset, Parent
......@@ -34,8 +35,9 @@ def populate_figure(fig_json):
f.create_dt = fig_json['graphics_create_date']
f.time_start, f.time_end = fig_json['period_record']
f.lat_min, f.lat_max, f.lon_min, f.lon_max = fig_json['spatial_extent']
f.remote_path = fig_json['filepath']
except Exception, e:
print e
print 'Exception: ', e
return f
......@@ -49,7 +51,7 @@ def populate_image(img_json):
img.time_start, img.time_end = img_json['period_record']
img.lat_min, img.lat_max, img.lon_min, img.lon_max = img_json['spatial_extent']
except Exception, e:
print e
print 'Exception: ', e
return img
......@@ -60,7 +62,7 @@ def populate_dataset(ds_json):
ds.name = ds_json['dataset_name']
ds.url = ds_json['dataset_url']
except Exception, e:
print e
print 'Exception: ', e
image_select = ds_json['imageSelect'] if 'imageSelect' in ds_json else []
associated_images = [idx for idx, value in enumerate(image_select) if value == 'on']
......@@ -76,13 +78,13 @@ def populate_parent(pub_json):
p.url = ''
except Exception, e:
print e
print 'Exception: ', e
return p
class SurveyClient:
def __init__(self, url, token, local_image_dir=None, remote_dir='/system/files/'):
def __init__(self, url, token, local_download_dir='.'):
self.base_url = url
#If token was not provided, obtain it
......@@ -91,29 +93,30 @@ class SurveyClient:
self.token = token
if local_image_dir:
self.images_dir = local_image_dir
else:
from gcis_clients import default_image_dir
self.images_dir = default_image_dir()
self.remote_image_dir = remote_dir
self.local_download_dir = local_download_dir
def get_list(self):
url = '{b}/metadata/list?token={t}'.format(b=self.base_url, t=self.token)
return requests.get(url).json()
def get_survey(self, fig_url, download_images=False):
def get_survey(self, fig_url, do_download=False):
full_url = '{b}{url}?token={t}'.format(b=self.base_url, url=fig_url, t=self.token)
survey_json = requests.get(full_url).json()
tier1_json = survey_json[0]['t1']
fig_json = tier1_json['figure']
tier1_json = survey_json[0]['t1'] if survey_json[0]['t1'] is not None else []
f = None
#It's not worth trying to translations on this data; it's too different
f = populate_figure(fig_json)
if 'figure' in tier1_json:
#It's not worth trying to translations on this data; it's too different
f = populate_figure(tier1_json['figure'])
f.local_path = join(self.local_download_dir, basename(f.remote_path)) if f.remote_path else None
if 'images' in tier1_json:
images = [populate_image(img) for img in tier1_json['images']]
f.images.extend(images)
elif 'figure' in tier1_json:
default_image = populate_image(tier1_json['figure'])
f.images.append(default_image)
if 'datasets' in tier1_json:
datasets = [populate_dataset(ds) for ds in tier1_json['datasets']]
......@@ -126,5 +129,24 @@ class SurveyClient:
if 'origination' in tier1_json and tier1_json['origination'] not in ('Original',):
f.parents.append(populate_parent(tier1_json['publication']))
if do_download:
self.download_figure(f)
return f
def download_figure(self, figure):
url = '{b}/{path}?token={t}'.format(b=self.base_url, path=figure.remote_path, t=self.token)
print url
resp = requests.get(url, stream=True)
if resp.status_code == 200:
filepath = join(self.local_download_dir, figure.remote_path.split('/')[-1])
with open(filepath, 'wb') as fig_out:
for bytes in resp.iter_content(chunk_size=4096):
fig_out.write(bytes)
return filepath
elif resp.status_code == 404:
raise Exception('Image not found: {u}'.format(u=url))
else:
raise Exception(resp.status_code)
\ No newline at end of file
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